Difference between revisions of "PhrG"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[rapG]]'', ''[[rocF]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[rapG]]'', ''[[rocF]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU40310 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU40310 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU40310 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU40310 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU40310 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU40310 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:phrG_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:phrG_context.gif]]

Revision as of 11:44, 14 May 2013

Gene name phrG
Synonyms yycL
Essential no
Product phosphatase (RapG) regulator
Function control of DegU activity
Gene expression levels in SubtiExpress: phrG
Interactions involving this protein in SubtInteract: PhrG
MW, pI 4 kDa, 9.017
Gene length, protein length 114 bp, 38 aa
Immediate neighbours rapG, rocF
Sequences Protein DNA DNA_with_flanks
Genetic context
PhrG context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
PhrG expression.png
























Categories containing this gene/protein

transcription factors and their control, quorum sensing, short peptides

This gene is a member of the following regulons

CcpA regulon, RghR regulon, SigH regulon

The gene

Basic information

  • Locus tag: BSU40310

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: binds to RapG, this results in the inability of RapG to interact with DegU PubMed
  • Protein family: phr family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References