Difference between revisions of "CimH"
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[cydA]]'', ''[[yxkI]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[cydA]]'', ''[[yxkI]]'' | ||
|- | |- | ||
− | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU38770 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU38770 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU38770 | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU38770 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU38770 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU38770 DNA_with_flanks] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:yxkJ_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yxkJ_context.gif]] |
Revision as of 11:38, 14 May 2013
- Description: transporter for citrate (proton symport)
Gene name | cimH |
Synonyms | yxkJ |
Essential | no |
Product | transporter for citrate (proton symport) |
Function | citrate uptake |
Gene expression levels in SubtiExpress: cimH | |
Metabolic function and regulation of this protein in SubtiPathways: Central C-metabolism | |
MW, pI | 48 kDa, 6.554 |
Gene length, protein length | 1350 bp, 450 aa |
Immediate neighbours | cydA, yxkI |
Sequences | Protein DNA DNA_with_flanks |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
transporters/ other, utilization of specific carbon sources, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU38770
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: uptake of citrate (symport with protons) PubMed
- Protein family: sodium:citrate (SCF) symporter family (according to Swiss-Prot) 2-hydroxycarboxylate transporter family
- Paralogous protein(s): MaeN
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- cell membrane (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: P94363
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Reviews
Original publications
Lehnik-Habrink M, Schaffer M, Mäder U, Diethmaier C, Herzberg C, Stülke J RNA processing in Bacillus subtilis: identification of targets of the essential RNase Y. Mol Microbiol. 2011 81(6): 1459-1473. PubMed:21815947