Difference between revisions of "CydC"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[cydD]]'', ''[[cydB]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[cydD]]'', ''[[cydB]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU38740 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU38740 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU38740 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU38740 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU38740 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU38740 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:cydC_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:cydC_context.gif]]

Revision as of 11:37, 14 May 2013

  • Description: ABC transporter required for expression of cytochrome bd (ATP-binding protein)

Gene name cydC
Synonyms yxkM
Essential no
Product ABC transporter (ATP-binding protein)
Function required for expression of cytochrome bd
Gene expression levels in SubtiExpress: cydC
Interactions involving this protein in SubtInteract: CydC
MW, pI 62 kDa, 8.511
Gene length, protein length 1701 bp, 567 aa
Immediate neighbours cydD, cydB
Sequences Protein DNA DNA_with_flanks
Genetic context
CydC context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
CydC expression.png
























Categories containing this gene/protein

ABC transporters, respiration, membrane proteins

This gene is a member of the following regulons

CcpA regulon, ResD regulon, Rex regulon

The gene

Basic information

  • Locus tag: BSU38740

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains: has both a membrane-spanning and an ATP-binding domain PubMed
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
    • repressed by glucose (CcpA)
    • induced under anaerobic conditions (Rex) PubMed
    • expressed under anaerobic conditions (ResD) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References