Difference between revisions of "YraA"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[adhA]]'', ''[[sacC]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[adhA]]'', ''[[sacC]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU27020 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU27020 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU27020 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU27020 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU27020 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU27020 DNA_with_flanks]
 
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Revision as of 10:50, 14 May 2013

  • Description: general stress protein, degradation of damaged thiol-containing proteins

Gene name yraA
Synonyms
Essential no
Product cysteine proteinase
Function degradation of damaged thiol-containing proteins
Gene expression levels in SubtiExpress: yraA
MW, pI 18 kDa, 4.729
Gene length, protein length 507 bp, 169 aa
Immediate neighbours adhA, sacC
Sequences Protein DNA DNA_with_flanks
Genetic context
YraA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
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Categories containing this gene/protein

proteolysis, general stress proteins (controlled by SigB), resistance against oxidative and electrophile stress

This gene is a member of the following regulons

AdhR regulon, SigB regulon, SigM regulon

The gene

Basic information

  • Locus tag: BSU27020

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: peptidase C56 family (according to Swiss-Prot)
  • Paralogous protein(s): YfkM

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References