Difference between revisions of "PapA"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[efp]]'', ''[[yqhS]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[efp]]'', ''[[yqhS]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU24460 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU24460 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU24460 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU24460 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU24460 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU24460 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:yqhT_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yqhT_context.gif]]

Revision as of 10:42, 14 May 2013

  • Description: Xaa-Pro amino-peptidase

Gene name papA
Synonyms yqhT
Essential no
Product Xaa-Pro amino-peptidase
Function degradation of proline-containing peptides
Gene expression levels in SubtiExpress: papA
Metabolic function and regulation of this protein in SubtiPathways:
Alternative nitrogen sources
MW, pI 37 kDa, 4.83
Gene length, protein length 1059 bp, 353 aa
Immediate neighbours efp, yqhS
Sequences Protein DNA DNA_with_flanks
Genetic context
YqhT context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YqhT expression.png















Categories containing this gene/protein

utilization of nitrogen sources other than amino acids, coping with hyper-osmotic stress

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU24460

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: peptidase M24B family (according to Swiss-Prot)
  • Paralogous protein(s): PapB

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure: 3Q6D (the B. anthracis enzyme, 65% identity, 82% similarity)
  • KEGG entry: [2]

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Erhard Bremer, Marburg University, Germany Homepage

Your additional remarks

References