Difference between revisions of "CwlP"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yomJ]]'', ''[[yomH]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yomJ]]'', ''[[yomH]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU21350 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU21350 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU21350 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU21350 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU21350 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU21350 DNA_with_flanks]
 
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Revision as of 10:30, 14 May 2013

  • Description: cell wall hydrolase of the SP-beta prophage region,

Gene name cwlP
Synonyms yomI
Essential no
Product cell wall hydrolase
Function cell wall turnover
Gene expression levels in SubtiExpress: cwlP
MW, pI 252 kDa, 8.268
Gene length, protein length 6855 bp, 2285 aa
Immediate neighbours yomJ, yomH
Sequences Protein DNA DNA_with_flanks
Genetic context
YomI context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
CwlP expression.png
























Categories containing this gene/protein

cell wall degradation/ turnover, SP-beta prophage

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU21350

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: hydrolyzes the peptidoglycan and cell wall of B. subtilis PubMed
  • Protein family: FPP/GGPP synthetase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains: contains soluble lytic transglycosylase (SLT) and peptidase M23 domains PubMed
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed