Difference between revisions of "CsbB"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yfhM]]'', ''[[yfhO]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yfhM]]'', ''[[yfhO]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU08600 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU08600 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU08600 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU08600 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU08600 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU08600 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:csbB_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:csbB_context.gif]]

Revision as of 09:45, 14 May 2013

  • Description: putative bactoprenol glycosyltransferase, general stress protein

Gene name csbB
Synonyms yfhN
Product putative bactoprenol glycosyltransferase
Function survival of ethanol and salt stress
Gene expression levels in SubtiExpress: csbB
MW, pI 37 kDa, 9.199
Gene length, protein length 987 bp, 329 aa
Immediate neighbours yfhM, yfhO
Sequences Protein DNA DNA_with_flanks
Genetic context
CsbB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
CsbB expression.png















Categories containing this gene/protein

general stress proteins (controlled by SigB), cell envelope stress proteins (controlled by SigM, V, W, X, Y), membrane proteins

This gene is a member of the following regulons

SigB regulon, SigX regulon

The gene

Basic information

  • Locus tag: BSU08600

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: GtrB subfamily (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Hiromi Inoue, Daisuke Suzuki, Kei Asai
A putative bactoprenol glycosyltransferase, CsbB, in Bacillus subtilis activates SigM in the absence of co-transcribed YfhO.
Biochem Biophys Res Commun: 2013, 436(1);6-11
[PubMed:23632331] [WorldCat.org] [DOI] (I p)

Dirk Höper, Uwe Völker, Michael Hecker
Comprehensive characterization of the contribution of individual SigB-dependent general stress genes to stress resistance of Bacillus subtilis.
J Bacteriol: 2005, 187(8);2810-26
[PubMed:15805528] [WorldCat.org] [DOI] (P p)

X Huang, J D Helmann
Identification of target promoters for the Bacillus subtilis sigma X factor using a consensus-directed search.
J Mol Biol: 1998, 279(1);165-73
[PubMed:9636707] [WorldCat.org] [DOI] (P p)

S Akbar, C W Price
Isolation and characterization of csbB, a gene controlled by Bacillus subtilis general stress transcription factor sigma B.
Gene: 1996, 177(1-2);123-8
[PubMed:8921856] [WorldCat.org] [DOI] (P p)