Difference between revisions of "YetO"

From SubtiWiki
Jump to: navigation, search
Line 21: Line 21:
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yetN]]'', ''[[yfnI]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yetN]]'', ''[[yfnI]]''
 
|-
 
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU07250 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU07250 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU07250 Advanced_DNA]
+
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU07250 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU07250 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU07250 DNA_with_flanks]
 
|-
 
|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yetO_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yetO_context.gif]]

Revision as of 09:40, 14 May 2013

Gene name yetO
Synonyms yfnJ , cypD
Essential no
Product NADPH-cytochrome P450 reductase
Function fatty acid metabolism
Gene expression levels in SubtiExpress: yetO
MW, pI 119 kDa, 5.732
Gene length, protein length 3183 bp, 1061 aa
Immediate neighbours yetN, yfnI
Sequences Protein DNA DNA_with_flanks
Genetic context
YetO context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YetO expression.png

























Categories containing this gene/protein

electron transport/ other, lipid metabolism/ other

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU07250

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
    • oxidation of even- and odd-chain saturated and unsaturated fatty acids to the respective omega-3, omega-2 and omega-1 hydroxylated fatty acids PubMed
  • Protein family:
  • Paralogous protein(s): YrhJ

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure: 2X7Y (from Bacillus megaterium; 66% identity, 87% similarity)
  • KEGG entry: [2]

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References