Difference between revisions of "YclQ"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yclP]]'', ''[[ycnB]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yclP]]'', ''[[ycnB]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU03830 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU03830 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU03830 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU03830 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU03830 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU03830 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:yclQ_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yclQ_context.gif]]

Revision as of 09:28, 14 May 2013

  • Description: petrobactin (3.4-catecholate siderophore) ABC transporter (binding protein), major component of the secretome

Gene name yclQ
Synonyms
Essential no
Product petrobactin ABC transporter (binding protein)
Function acquisition of iron
Gene expression levels in SubtiExpress: yclQ
Interactions involving this protein in SubtInteract: YclQ
MW, pI 34 kDa, 6.628
Gene length, protein length 951 bp, 317 aa
Immediate neighbours yclP, ycnB
Sequences Protein DNA DNA_with_flanks
Genetic context
YclQ context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YclQ expression.png
























Categories containing this gene/protein

ABC transporters, acquisition of iron, iron metabolism, membrane proteins

This gene is a member of the following regulons

Fur regulon

The gene

Basic information

  • Locus tag: BSU03830

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: uptake of the siderophore petrobactin PubMed
  • Protein family: Fe/B12 periplasmic-binding domain (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
    • repressed unless the cells enter an iron starvation (Fur) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed