Difference between revisions of "BglS"
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|style="background:#ABCDEF;" align="center"|'''Function''' || lichenan degradation | |style="background:#ABCDEF;" align="center"|'''Function''' || lichenan degradation | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU39070 bglS] |
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/carbohydrate_metabolic_pathways.html Sugar catabolism]''' | |colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/carbohydrate_metabolic_pathways.html Sugar catabolism]''' | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[citH]]'', ''[[licT]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[citH]]'', ''[[licT]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU39070 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU39070 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU39070 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:bglS_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:bglS_context.gif]] | ||
Revision as of 14:13, 13 May 2013
- Description: endo-beta-1,3-1,4 glucanase
| Gene name | bglS |
| Synonyms | bgl, licS |
| Essential | no |
| Product | endo-beta-1,3-1,4 glucanase |
| Function | lichenan degradation |
| Gene expression levels in SubtiExpress: bglS | |
| Metabolic function and regulation of this protein in SubtiPathways: Sugar catabolism | |
| MW, pI | 27 kDa, 6.482 |
| Gene length, protein length | 726 bp, 242 aa |
| Immediate neighbours | citH, licT |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
utilization of specific carbon sources
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU39070
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: Hydrolysis of (1->4)-beta-D-glucosidic linkages in beta-D-glucans containing (1->3)- and (1->4)-bonds (according to Swiss-Prot)
- Protein family: glycosyl hydrolase 16 family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: extracellular (signal peptide) PubMed
Database entries
- Structure: 3O5S
- UniProt: P04957
- KEGG entry: [3]
- E.C. number: 3.2.1.73
Additional information
Expression and regulation
- Regulation:
- Regulatory mechanism:
- CcpA: transcription repression PubMed
- LicT: binding to an RNA switch results in transcriptional antitermination PubMed
- Additional information:
Biological materials
- Mutant: GP427 (licT-bglS, erm), BGW7 (cat), both available in the Stülke lab
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
