Difference between revisions of "Crh"
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|style="background:#ABCDEF;" align="center"|'''Function''' || control of carbon flux | |style="background:#ABCDEF;" align="center"|'''Function''' || control of carbon flux | ||
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− | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU34740 crh] |
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/Crh Crh] | |colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/Crh Crh] | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yvcN]]'', ''[[yvcL]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yvcN]]'', ''[[yvcL]]'' | ||
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− | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU34740 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU34740 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU34740 Advanced_DNA] |
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|colspan="2" | '''Genetic context''' <br/> [[Image:crh_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:crh_context.gif]] |
Revision as of 13:56, 13 May 2013
- Description: "Carbon-flux regulating HPr", formerly known as "Catabolite repression HPr-like protein", control of flux through the harmful methylglyoxal pathway, minor cofactor of the CcpA transcription factor
Gene name | crh |
Synonyms | yvcM |
Essential | no |
Product | carbon-flux regulating HPr |
Function | control of carbon flux |
Gene expression levels in SubtiExpress: crh | |
Interactions involving this protein in SubtInteract: Crh | |
Metabolic function and regulation of this protein in SubtiPathways: Central C-metabolism | |
MW, pI | 9,2 kDa, 4.70 |
Gene length, protein length | 255 bp, 85 amino acids |
Immediate neighbours | yvcN, yvcL |
Sequences | Protein DNA Advanced_DNA |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
transcription factors and their control, phosphoproteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU34740
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: HPr family
- Paralogous protein(s): HPr
Extended information on the protein
- Kinetic information:
- Domains: HPr domain (1–85)
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: O06976
- KEGG entry: [2]
Additional information
Crh does not possess the phosphorylation site used for PTS phosphotransfer (His-15 in PtsH), it can only be phosphorylated on Ser-46
Expression and regulation
- Regulation: very weak stimuation of expression by citrate and succinate PubMed
- Regulatory mechanism:
- Additional information: Crh is weakly expressed. This results in part from a poorly conserved ribosomal binding site of the mRNA. PubMed
Biological materials
- Mutant: GP860 (aphA3), QB7097 (spc), available in Stülke lab
- Expression vector:
- lacZ fusion: see yvcI
- GFP fusion:
- two-hybrid system: crh, crh(Ser46Asp), crh(Ser46Ala) B. pertussis adenylate cyclase-based bacterial two hybrid system (BACTH), available in Görke lab
- FLAG-tag construct:
- GP69 (spc, based on pGP1331), available in the Boris Görke and Stülke labs
- pGP1200 crh(Ser46Ala) (spc, based on pGP1331), available in the Stülke lab
Labs working on this gene/protein
Boris Görke, University of Göttingen, Germany Homepage
Anne Galinier, University of Marseille, France
Wolfgang Hillen, Erlangen University, Germany Homepage
Richard Brennan, Houston, Texas, USA Homepage
Your additional remarks
References