Difference between revisions of "PadC"
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|style="background:#ABCDEF;" align="center"|'''Function''' || resistance to salicylic acid | |style="background:#ABCDEF;" align="center"|'''Function''' || resistance to salicylic acid | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU34400 padC] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 18 kDa, 4.871 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 18 kDa, 4.871 | ||
| Line 22: | Line 22: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[pnbA]]'', ''[[yveG]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[pnbA]]'', ''[[yveG]]'' | ||
|- | |- | ||
| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU34400 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU34400 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU34400 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:padC_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:padC_context.gif]] | ||
Revision as of 13:55, 13 May 2013
- Description: phenolic acid decarboxylase
| Gene name | padC |
| Synonyms | pad, yveH |
| Essential | no |
| Product | phenolic acid decarboxylase |
| Function | resistance to salicylic acid |
| Gene expression levels in SubtiExpress: padC | |
| MW, pI | 18 kDa, 4.871 |
| Gene length, protein length | 483 bp, 161 aa |
| Immediate neighbours | pnbA, yveG |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
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Contents
Categories containing this gene/protein
resistance against other toxic compounds (nitric oxide, phenolic acids, flavonoids, oxalate)
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU34400
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: padC family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure: 2P8G
- UniProt: O07006
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Thi Kim Chi Nguyen, Ngoc Phuong Tran, Jean-François Cavin
Genetic and biochemical analysis of PadR-padC promoter interactions during the phenolic acid stress response in Bacillus subtilis 168.
J Bacteriol: 2011, 193(16);4180-91
[PubMed:21685295]
[WorldCat.org]
[DOI]
(I p)
Ngoc Phuong Tran, Jerôme Gury, Véronique Dartois, Thi Kim Chi Nguyen, Hélène Seraut, Lise Barthelmebs, Patrick Gervais, Jean-François Cavin
Phenolic acid-mediated regulation of the padC gene, encoding the phenolic acid decarboxylase of Bacillus subtilis.
J Bacteriol: 2008, 190(9);3213-24
[PubMed:18326577]
[WorldCat.org]
[DOI]
(I p)
Nguyen Van Duy, Ulrike Mäder, Ngoc Phuong Tran, Jean-François Cavin, Le Thi Tam, Dirk Albrecht, Michael Hecker, Haike Antelmann
The proteome and transcriptome analysis of Bacillus subtilis in response to salicylic acid.
Proteomics: 2007, 7(5);698-710
[PubMed:17295427]
[WorldCat.org]
[DOI]
(P p)
J F Cavin, V Dartois, C Diviès
Gene cloning, transcriptional analysis, purification, and characterization of phenolic acid decarboxylase from Bacillus subtilis.
Appl Environ Microbiol: 1998, 64(4);1466-71
[PubMed:9546183]
[WorldCat.org]
[DOI]
(P p)
