Difference between revisions of "YumC"
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|style="background:#ABCDEF;" align="center"|'''Function''' || redox reactions that involve ferredoxin | |style="background:#ABCDEF;" align="center"|'''Function''' || redox reactions that involve ferredoxin | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU32110 yumC] |
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 36 kDa, 5.573 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 36 kDa, 5.573 | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yumB]]'', ''[[yuzG]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yumB]]'', ''[[yuzG]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU32110 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU32110 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU32110 Advanced_DNA] |
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|colspan="2" | '''Genetic context''' <br/> [[Image:yumC_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yumC_context.gif]] | ||
Revision as of 13:45, 13 May 2013
- Description: ferredoxin-NAD(P)+ oxidoreductase
| Gene name | yumC |
| Synonyms | |
| Essential | yes PubMed |
| Product | ferredoxin-NAD(P)+ oxidoreductase |
| Function | redox reactions that involve ferredoxin |
| Gene expression levels in SubtiExpress: yumC | |
| MW, pI | 36 kDa, 5.573 |
| Gene length, protein length | 996 bp, 332 aa |
| Immediate neighbours | yumB, yuzG |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
electron transport/ other, essential genes
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU32110
Phenotypes of a mutant
essential PubMed
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: 2 reduced ferredoxin + NADP+ + H+ = 2 oxidized ferredoxin + NADPH (according to Swiss-Prot)
- Protein family: ferredoxin--NADP reductase type 2 family (according to Swiss-Prot)http://www.ncbi.nlm.nih.gov/pubmed
- Paralogous protein(s): YcgT
Extended information on the protein
- Kinetic information:
- Domains:
- Modification: active site Cys85 is S-bacillithiolated by NaOCl stress in B. subtilis and other Bacillus speciesPubMed
- Cofactor(s): FAD, NADPH PubMed
- Effectors of protein activity:
- Interactions: dimeric protein PubMed
- Localization:
Database entries
- UniProt: O05268
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
