Difference between revisions of "AlaT"
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|style="background:#ABCDEF;" align="center"|'''Function''' || unknown | |style="background:#ABCDEF;" align="center"|'''Function''' || unknown | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU31400 alaT] |
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 42 kDa, 5.106 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 42 kDa, 5.106 | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yugI]]'', ''[[alaR]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yugI]]'', ''[[alaR]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU31400 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU31400 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU31400 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:alaT_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:alaT_context.gif]] | ||
Revision as of 13:43, 13 May 2013
- Description: similar to PLP-dependent methionine aminotransferase
| Gene name | alaT |
| Synonyms | yugH |
| Essential | no |
| Product | unknown |
| Function | unknown |
| Gene expression levels in SubtiExpress: alaT | |
| MW, pI | 42 kDa, 5.106 |
| Gene length, protein length | 1158 bp, 386 aa |
| Immediate neighbours | yugI, alaR |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
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Contents
Categories containing this gene/protein
poorly characterized/ putative enzymes
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU31400
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: Q795M6
- KEGG entry: [2]
- E.C. number:
Additional information
The gene is annotated in KEGG as an ortholog of N-succinyldiaminopimelate aminotransferase EC 2.6.1.17. It is annotated in Swiss-Prot as “alanine transaminase”. In MetaCyc the gene is marked as “similar to aspartate aminotransferase”. No literature/experimental evidence supporting the annotation is available. PubMed
Expression and regulation
- Sigma factor:
- Regulation:
- Regulatory mechanism:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
