Difference between revisions of "YtvA"
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|style="background:#ABCDEF;" align="center"|'''Function''' || control of [[SigB]] activity | |style="background:#ABCDEF;" align="center"|'''Function''' || control of [[SigB]] activity | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU30340 ytvA] |
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/YtvA YtvA] | |colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/YtvA YtvA] | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ytvB]]'', ''[[yttB]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ytvB]]'', ''[[yttB]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU30340 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU30340 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU30340 Advanced_DNA] |
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|colspan="2" | '''Genetic context''' <br/> [[Image:ytvA_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:ytvA_context.gif]] | ||
Revision as of 13:39, 13 May 2013
- Description: blue light sensor, positive regulation of SigB activity under conditions of blue light
| Gene name | ytvA |
| Synonyms | |
| Essential | no |
| Product | blue light receptor, flavoprotein |
| Function | control of SigB activity |
| Gene expression levels in SubtiExpress: ytvA | |
| Interactions involving this protein in SubtInteract: YtvA | |
| MW, pI | 29 kDa, 4.69 |
| Gene length, protein length | 783 bp, 261 aa |
| Immediate neighbours | ytvB, yttB |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
sigma factors and their control
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU30340
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
Extended information on the protein
- Kinetic information:
- Domains: LOV domain, STAS domain
- Modification:
- Cofactor(s): FMN
- Effectors of protein activity:
Database entries
- UniProt: O34627
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Additional information:
Biological materials
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
- Chet Price, Davis, USA homepage
Your additional remarks
References
Reviews
Additional reviews: PubMed
Original publications
Additional publications: PubMed
