Difference between revisions of "KinA"

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|style="background:#ABCDEF;" align="center"|'''Function''' || initiation of sporulation
 
|style="background:#ABCDEF;" align="center"|'''Function''' || initiation of sporulation
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU13990 kinA]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU13990 kinA]
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/KinA KinA]
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/KinA KinA]
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[pbpH]]'', ''[[patA]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[pbpH]]'', ''[[patA]]''
 
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB13272&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU13990 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU13990 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU13990 Advanced_DNA]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:kinA_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:kinA_context.gif]]

Revision as of 12:41, 13 May 2013

Gene name kinA
Synonyms spoIIF, spoIIJ, gsiC, scoB, scoD
Essential no
Product two-component sensor kinase
Function initiation of sporulation
Gene expression levels in SubtiExpress: kinA
Interactions involving this protein in SubtInteract: KinA
Function and regulation of this protein in SubtiPathways:
Phosphorelay
MW, pI 68 kDa, 5.491
Gene length, protein length 1818 bp, 606 aa
Immediate neighbours pbpH, patA
Sequences Protein DNA Advanced_DNA
Genetic context
KinA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
KinA expression.png















Categories containing this gene/protein

protein modification, transcription factors and their control, phosphorelay, phosphoproteins

This gene is a member of the following regulons

SigH regulon, Spo0A regulon, stringent response

The gene

Basic information

  • Locus tag: BSU13990

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
    • autophosphorylation, phosphorylation of Spo0F
    • mainly active in the older, inner regions of a colony (with KinB) PubMed
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
    • three tandem PAS domains in the N-terminal region of KinA, the second PAS domain is the major N-terminal determinant of KinA dimerization PubMed
    • the first PAS domain is required for NAD(+) binding PubMed
    • C-terminal histidine phosphotransferase domain
  • Modification: autophosphorylation on a His residue
  • Cofactor(s):
  • Effectors of protein activity:
    • interaction with KipI or Sda inhibits autophosphorylation of KinA PubMed
    • autophosphorylation is inhibited by SivA and BslA PubMed
    • activated by interaction with NAD(+) that indicated poor respiratory activity of the cell PubMed

Database entries

  • Structure: 2VLG (PAS domain)
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Reviews

Liza Gross
Built-in timer delays differentiation.
PLoS Biol: 2012, 10(1);e1001254
[PubMed:22303284] [WorldCat.org] [DOI] (I p)

Original Publications