Difference between revisions of "KinA"
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|style="background:#ABCDEF;" align="center"|'''Function''' || initiation of sporulation | |style="background:#ABCDEF;" align="center"|'''Function''' || initiation of sporulation | ||
|- | |- | ||
− | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU13990 kinA] |
|- | |- | ||
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/KinA KinA] | |colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/KinA KinA] | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[pbpH]]'', ''[[patA]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[pbpH]]'', ''[[patA]]'' | ||
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− | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU13990 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU13990 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU13990 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:kinA_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:kinA_context.gif]] |
Revision as of 12:41, 13 May 2013
- Description: two-component sensor kinase, phosphorylates Spo0F, part of the phosphorelay
Gene name | kinA |
Synonyms | spoIIF, spoIIJ, gsiC, scoB, scoD |
Essential | no |
Product | two-component sensor kinase |
Function | initiation of sporulation |
Gene expression levels in SubtiExpress: kinA | |
Interactions involving this protein in SubtInteract: KinA | |
Function and regulation of this protein in SubtiPathways: Phosphorelay | |
MW, pI | 68 kDa, 5.491 |
Gene length, protein length | 1818 bp, 606 aa |
Immediate neighbours | pbpH, patA |
Sequences | Protein DNA Advanced_DNA |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
protein modification, transcription factors and their control, phosphorelay, phosphoproteins
This gene is a member of the following regulons
SigH regulon, Spo0A regulon, stringent response
The gene
Basic information
- Locus tag: BSU13990
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification: autophosphorylation on a His residue
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- cytoplasm
Database entries
- Structure: 2VLG (PAS domain)
- UniProt: P16497
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- expressed under conditions that trigger sporulation (Spo0A) PubMed
- induced upon addition of decoyinine (positive stringent response) PubMed
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Reviews
Liza Gross
Built-in timer delays differentiation.
PLoS Biol: 2012, 10(1);e1001254
[PubMed:22303284]
[WorldCat.org]
[DOI]
(I p)
Original Publications