Difference between revisions of "YkkE"
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|style="background:#ABCDEF;" align="center"|'''Function''' || purine nucleotide synthesis | |style="background:#ABCDEF;" align="center"|'''Function''' || purine nucleotide synthesis | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU13110 ykkE] |
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 34 kDa, 5.949 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 34 kDa, 5.949 | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ykkD]]'', ''[[proB]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ykkD]]'', ''[[proB]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU13110 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU13110 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU13110 Advanced_DNA] |
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Revision as of 12:38, 13 May 2013
- Description: formyltetrahydrofolate deformylase
| Gene name | ykkE |
| Synonyms | purU |
| Essential | no |
| Product | formyltetrahydrofolate deformylase |
| Function | purine nucleotide synthesis |
| Gene expression levels in SubtiExpress: ykkE | |
| MW, pI | 34 kDa, 5.949 |
| Gene length, protein length | 900 bp, 300 aa |
| Immediate neighbours | ykkD, proB |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
biosynthesis/ acquisition of nucleotides
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU13110
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: 10-formyltetrahydrofolate + H2O = formate + tetrahydrofolate (according to Swiss-Prot)
- Protein family: ACT domain (according to Swiss-Prot)
- Paralogous protein(s): PurN
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: O34990
- KEGG entry: [2]
- E.C. number: 3.5.1.10
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
