Difference between revisions of "XlyA"
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|style="background:#ABCDEF;" align="center"|'''Function''' || [[PBSX prophage]]-mediated lysis | |style="background:#ABCDEF;" align="center"|'''Function''' || [[PBSX prophage]]-mediated lysis | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU12810 xlyA] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 31 kDa, 5.342 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 31 kDa, 5.342 | ||
| Line 21: | Line 21: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[xhlB]]'', ''[[spoIISB]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[xhlB]]'', ''[[spoIISB]]'' | ||
|- | |- | ||
| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU12810 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU12810 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU12810 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:xlyA_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:xlyA_context.gif]] | ||
Revision as of 12:37, 13 May 2013
- Description: N-acetylmuramoyl-L-alanine amidase
| Gene name | xlyA |
| Synonyms | |
| Essential | no |
| Product | N-acetylmuramoyl-L-alanine amidase |
| Function | PBSX prophage-mediated lysis |
| Gene expression levels in SubtiExpress: xlyA | |
| MW, pI | 31 kDa, 5.342 |
| Gene length, protein length | 891 bp, 297 aa |
| Immediate neighbours | xhlB, spoIISB |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
cell wall degradation/ turnover, PBSX prophage
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU12810
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: Hydrolyzes the link between N-acetylmuramoyl residues and L-amino acid residues in certain cell-wall glycopeptides (according to Swiss-Prot)
- Protein family: LysM repeat (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- extracellular (no signal peptide) PubMed
Database entries
- UniProt: P39800
- KEGG entry: [2]
- E.C. number: 3.5.1.28
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
