Difference between revisions of "SerC"
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|style="background:#ABCDEF;" align="center"|'''Function''' || biosynthesis of serine | |style="background:#ABCDEF;" align="center"|'''Function''' || biosynthesis of serine | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU10020 serC] |
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/ala_gly_ser.html Ala, Gly, Ser]''' | |colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/ala_gly_ser.html Ala, Gly, Ser]''' | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[trpP]]'', ''[[hit]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[trpP]]'', ''[[hit]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU10020 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU10020 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU10020 Advanced_DNA] |
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|colspan="2" | '''Genetic context''' <br/> [[Image:serC_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:serC_context.gif]] | ||
Revision as of 12:28, 13 May 2013
- Description: 3-phosphoserine aminotransferase
| Gene name | serC |
| Synonyms | yhaF |
| Essential | no |
| Product | 3-phosphoserine aminotransferase |
| Function | biosynthesis of serine |
| Gene expression levels in SubtiExpress: serC | |
| Metabolic function and regulation of this protein in SubtiPathways: Ala, Gly, Ser | |
| MW, pI | 39 kDa, 5.522 |
| Gene length, protein length | 1077 bp, 359 aa |
| Immediate neighbours | trpP, hit |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
biosynthesis/ acquisition of amino acids
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU10020
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: O-phospho-L-serine + 2-oxoglutarate = 3-phosphonooxypyruvate + L-glutamate (according to Swiss-Prot)
- Protein family: SerC subfamily (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: cytoplasm (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: P80862
- KEGG entry: [2]
- E.C. number: 2.6.1.52
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
