Difference between revisions of "YfmS"
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|style="background:#ABCDEF;" align="center"|'''Function''' || control of chemotaxis | |style="background:#ABCDEF;" align="center"|'''Function''' || control of chemotaxis | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU07360 yfmS] |
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 30 kDa, 4.527 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 30 kDa, 4.527 | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yfmT]]'', ''[[yfmR]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yfmT]]'', ''[[yfmR]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU07360 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU07360 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU07360 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:yfmS_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yfmS_context.gif]] | ||
Revision as of 12:20, 13 May 2013
- Description: soluble chemotaxis receptor
| Gene name | yfmS |
| Synonyms | |
| Essential | no |
| Product | soluble chemotaxis receptor |
| Function | control of chemotaxis |
| Gene expression levels in SubtiExpress: yfmS | |
| MW, pI | 30 kDa, 4.527 |
| Gene length, protein length | 858 bp, 286 aa |
| Immediate neighbours | yfmT, yfmR |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU07360
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- forms clusters at the cell poles PubMed
Database entries
- Structure:
- UniProt: O06477
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Regulatory mechanism:
- Additional information:
- in minimal medium, YfmS is present with 4,200 +/- 800 molecules per cell PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Vincent J Cannistraro, George D Glekas, Christopher V Rao, George W Ordal
Cellular stoichiometry of the chemotaxis proteins in Bacillus subtilis.
J Bacteriol: 2011, 193(13);3220-7
[PubMed:21515776]
[WorldCat.org]
[DOI]
(I p)
Masakuni Serizawa, Hiroki Yamamoto, Hirotake Yamaguchi, Yasutaro Fujita, Kazuo Kobayashi, Naotake Ogasawara, Junichi Sekiguchi
Systematic analysis of SigD-regulated genes in Bacillus subtilis by DNA microarray and Northern blotting analyses.
Gene: 2004, 329;125-36
[PubMed:15033535]
[WorldCat.org]
[DOI]
(P p)
Hiroki Yamamoto, Shigeki Uchiyama, Fajar Aji Nugroho, Junichi Sekiguchi
A 23.4 kb segment at the 69 degrees-70 degrees region of the Bacillus subtilis genome.
Microbiology (Reading): 1997, 143 ( Pt 4);1317-1320
[PubMed:9141694]
[WorldCat.org]
[DOI]
(P p)
