Difference between revisions of "YcxA"
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|style="background:#ABCDEF;" align="center"|'''Function''' || unknown | |style="background:#ABCDEF;" align="center"|'''Function''' || unknown | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU03530 ycxA] |
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 44 kDa, 8.762 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 44 kDa, 8.762 | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[srfAD]]'', ''[[ycxB]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[srfAD]]'', ''[[ycxB]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU03530 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU03530 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU03530 Advanced_DNA] |
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Revision as of 12:07, 13 May 2013
- Description: unknown
| Gene name | ycxA |
| Synonyms | |
| Essential | no |
| Product | unknown |
| Function | unknown |
| Gene expression levels in SubtiExpress: ycxA | |
| MW, pI | 44 kDa, 8.762 |
| Gene length, protein length | 1227 bp, 409 aa |
| Immediate neighbours | srfAD, ycxB |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
membrane proteins, proteins of unknown function
This gene is a member of the following regulons
ComA regulon, Efp-dependent proteins
The gene
Basic information
- Locus tag: BSU03530
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: major facilitator superfamily (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- cell membrane (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: Q08791
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: ycxA (according to DBTBS)
- Additional information:
- translation is likely to require Efp due to the presence of several consecutive proline residues PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Natalia Comella, Alan D Grossman
Conservation of genes and processes controlled by the quorum response in bacteria: characterization of genes controlled by the quorum-sensing transcription factor ComA in Bacillus subtilis.
Mol Microbiol: 2005, 57(4);1159-74
[PubMed:16091051]
[WorldCat.org]
[DOI]
(P p)
