Difference between revisions of "YlxX"
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= [[Categories]] containing this gene/protein = | = [[Categories]] containing this gene/protein = | ||
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{{SubtiWiki regulon|[[SigE regulon]]}}, | {{SubtiWiki regulon|[[SigE regulon]]}}, | ||
{{SubtiWiki regulon|[[SigM regulon]]}}, | {{SubtiWiki regulon|[[SigM regulon]]}}, | ||
| − | {{SubtiWiki regulon|[[SpoIIID regulon]]}} | + | {{SubtiWiki regulon|[[SpoIIID regulon]]}}, |
| + | [[Efp-dependent proteins]] | ||
=The gene= | =The gene= | ||
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ylxX_1595210_1595917_1 ylxX] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ylxX_1595210_1595917_1 ylxX] {{PubMed|22383849}} | ||
| − | * '''Sigma factor:''' | + | * '''[[Sigma factor]]:''' |
** ''[[spoVE]]'': [[SigE]] {{PubMed|8320223}} | ** ''[[spoVE]]'': [[SigE]] {{PubMed|8320223}} | ||
** ''[[murG]]'': [[SigM]]{{PubMed|18179421}} | ** ''[[murG]]'': [[SigM]]{{PubMed|18179421}} | ||
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* '''Additional information:''' | * '''Additional information:''' | ||
| + | ** [[translation]] is likely to require [[Efp]] due to the presence of several consecutive proline residues {{PubMed|23239624,23239623}} | ||
=Biological materials = | =Biological materials = | ||
Revision as of 19:35, 29 April 2013
- Description: unknown
| Gene name | ylxX |
| Synonyms | |
| Essential | no |
| Product | unknown |
| Function | unknown |
| Gene expression levels in SubtiExpress: ylxX | |
| Metabolic function and regulation of this protein in SubtiPathways: Cell wall | |
| MW, pI | 26 kDa, 8.965 |
| Gene length, protein length | 705 bp, 235 aa |
| Immediate neighbours | ylxW, sbp |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
sporulation proteins, cell envelope stress proteins (controlled by SigM, V, W, X, Y), membrane proteins
This gene is a member of the following regulons
SigE regulon, SigM regulon, SpoIIID regulon, Efp-dependent proteins
The gene
Basic information
- Locus tag: BSU15260
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: cell membrane (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: Q45544
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
- translation is likely to require Efp due to the presence of several consecutive proline residues PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Warawan Eiamphungporn, John D Helmann
The Bacillus subtilis sigma(M) regulon and its contribution to cell envelope stress responses.
Mol Microbiol: 2008, 67(4);830-48
[PubMed:18179421]
[WorldCat.org]
[DOI]
(P p)
E J Harry, S L Rowland, M S Malo, R G Wake
Expression of divIB of Bacillus subtilis during vegetative growth.
J Bacteriol: 1994, 176(4);1172-9
[PubMed:8106328]
[WorldCat.org]
[DOI]
(P p)
G Theeragool, A Miyao, K Yamada, T Sato, Y Kobayashi
In vivo expression of the Bacillus subtilis spoVE gene.
J Bacteriol: 1993, 175(13);4071-80
[PubMed:8320223]
[WorldCat.org]
[DOI]
(P p)
A O Henriques, H de Lencastre, P J Piggot
A Bacillus subtilis morphogene cluster that includes spoVE is homologous to the mra region of Escherichia coli.
Biochimie: 1992, 74(7-8);735-48
[PubMed:1391053]
[WorldCat.org]
[DOI]
(P p)
