Difference between revisions of "HemAT"
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU10380 hemAT] | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU10380 hemAT] | ||
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| + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/HemAT HemAT] | ||
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 48 kDa, 5.441 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 48 kDa, 5.441 | ||
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<br/><br/><br/><br/> | <br/><br/><br/><br/> | ||
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* '''Catalyzed reaction/ biological activity:''' | * '''Catalyzed reaction/ biological activity:''' | ||
| + | ** required for full expression of the ''[[phoD]]-[[tatAD]]-[[tatCD]]'' operon {{PubMed|23180473}} | ||
* '''Protein family:''' | * '''Protein family:''' | ||
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* '''[[SubtInteract|Interactions]]:''' | * '''[[SubtInteract|Interactions]]:''' | ||
| + | ** [[HemAT]]-[[TatAC]] {{PubMed|23180473}} | ||
* '''[[Localization]]:''' | * '''[[Localization]]:''' | ||
** forms clusters at the cell poles {{PubMed|21515776}} | ** forms clusters at the cell poles {{PubMed|21515776}} | ||
| + | ** homogeneous cytoplsmic distribution in chain-forming cells during the logarithmic phase {{PubMed|23180473}} | ||
| + | ** polar foci in individual cells at later growth stages {{PubMed|23180473}} | ||
=== Database entries === | === Database entries === | ||
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=hemAT_1112620_1113918_-1 hemAT] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=hemAT_1112620_1113918_-1 hemAT] {{PubMed|22383849}} | ||
| − | * '''Sigma factor:''' [[SigD]] {{PubMed|15033535}} | + | * '''[[Sigma factor]]:''' [[SigD]] {{PubMed|15033535}} |
* '''Regulation:''' | * '''Regulation:''' | ||
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=References= | =References= | ||
'''Additional publications:''' {{PubMed|22564695}} | '''Additional publications:''' {{PubMed|22564695}} | ||
| − | <pubmed>10676961,16819829,11481493,15033535 21515776</pubmed> | + | <pubmed>10676961,16819829,11481493,15033535 21515776 23180473</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 10:21, 30 November 2012
- Description: soluble chemotaxis receptor, heme-containing O(2) sensor protein
| Gene name | hemAT |
| Synonyms | yhfV |
| Essential | no |
| Product | haem-based aerotactic transducer |
| Function | movement towards oxygen |
| Gene expression levels in SubtiExpress: hemAT | |
| Interactions involving this protein in SubtInteract: HemAT | |
| MW, pI | 48 kDa, 5.441 |
| Gene length, protein length | 1296 bp, 432 aa |
| Immediate neighbours | yhfU, yhfW |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU10380
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s): heme
- Effectors of protein activity:
Database entries
- UniProt: O07621
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: hemAT PubMed
- Regulation:
- Regulatory mechanism:
- Additional information:
- in minimal medium, HemAT is present with 19,000 +/- 3,900 molecules per cell PubMed
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Additional publications: PubMed
