YdjO

• Description: unknown
  
  

Gene name	ydjO
Synonyms
Essential	no
Product	unknown
Function	unknown
Gene expression levels in SubtiExpress: ydjO
MW, pI	7 kDa, 7.643
Gene length, protein length	207 bp, 69 aa
Immediate neighbours	ydzJ, ydjP
Get the DNA and protein sequences (Barbe et al., 2009)
Genetic context This image was kindly provided by SubtiList
Expression at a glance   PubMed

Categories containing this gene/protein

cell envelope stress proteins (controlled by SigM, V, W, X, Y), cold stress proteins, phosphoproteins

This gene is a member of the following regulons

SigW regulon

The gene

Basic information

• Locus tag: BSU06270

Database entries

• DBTBS entry: [1]

• SubtiList entry: [2]

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity:

• Protein family:

• Paralogous protein(s):

Extended information on the protein

• Kinetic information:

• Domains:

• Modification:
  • phosphorylated on Arg-7 PubMed

• Cofactor(s):

• Effectors of protein activity:

• Interactions:
  • YdjO interacts with the RNA polymerase PubMed

• Localization:

Database entries

• Structure:

• UniProt: O34759

• KEGG entry: [3]

• E.C. number:

Expression and regulation

• Operon: yeaA-ydjP-ydjO PubMed

• Expression browser: ydjO PubMed

• Sigma factor: SigW PubMed

• Regulation:
  • induced by cold shock PubMed

• Regulatory mechanism:

• Additional information:

Biological materials

• Mutant:

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody:

References

Additional publications: PubMed

Alexander K W Elsholz, Kürsad Turgay, Stephan Michalik, Bernd Hessling, Katrin Gronau, Dan Oertel, Ulrike Mäder, Jörg Bernhardt, Dörte Becher, Michael Hecker, Ulf Gerth
Global impact of protein arginine phosphorylation on the physiology of Bacillus subtilis.
Proc Natl Acad Sci U S A: 2012, 109(19);7451-6
[PubMed:22517742] [WorldCat.org] [DOI] (I p)

Carsten L Beckering, Leif Steil, Michael H W Weber, Uwe Völker, Mohamed A Marahiel
Genomewide transcriptional analysis of the cold shock response in Bacillus subtilis.
J Bacteriol: 2002, 184(22);6395-402
[PubMed:12399512] [WorldCat.org] [DOI] (P p)

X Huang, A Gaballa, M Cao, J D Helmann
Identification of target promoters for the Bacillus subtilis extracytoplasmic function sigma factor, sigma W.
Mol Microbiol: 1999, 31(1);361-71
[PubMed:9987136] [WorldCat.org] [DOI] (P p)