Difference between revisions of "HtpX"

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m (moved YkrL to HtpX: 23042994)
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* '''Description:''' similar to ''E.coli'' HtpX heat shock protease, stress-responsive membrane protease<br/><br/>
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* '''Description:''' stress-responsive membrane protease<br/><br/>
  
 
{| align="right" border="1" cellpadding="2"  
 
{| align="right" border="1" cellpadding="2"  
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"|'''Gene name'''
 
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''ykrL''
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|''htpX''
 
|-
 
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''htpX ''
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|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''ykrL ''
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
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* '''[[SubtInteract|Interactions]]:'''
 
* '''[[SubtInteract|Interactions]]:'''
  
* '''Localization:''' cell membrane (according to Swiss-Prot)
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* '''[[Localization]]:'''  
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** cell membrane (according to Swiss-Prot)
  
 
=== Database entries ===
 
=== Database entries ===
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=References=
 
=References=
<pubmed> 22447908 22624725 22383849</pubmed>
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<pubmed> 22447908 22624725 22383849 23042994 </pubmed>
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 08:08, 9 October 2012

  • Description: stress-responsive membrane protease

Gene name htpX
Synonyms ykrL
Essential no
Product membrane protease
Function quality control of membrane proteins
Gene expression levels in SubtiExpress: ykrL
MW, pI 32 kDa, 10.157
Gene length, protein length 894 bp, 298 aa
Immediate neighbours ykrK, ktrD
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YkrL context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YkrL expression.png















Categories containing this gene/protein

membrane proteins, proteolysis

This gene is a member of the following regulons

Rok regulon, YkrK regulon,

The gene

Basic information

  • Locus tag: BSU13490

Phenotypes of a mutant

  • increased sensitivity to membrane protein overproduction PubMed
  • increased sensitivity to dissipation of the membrane potential by the addition of valinomycin PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: peptidase M48B family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
    • induced by membrane protein overproduction (YkrK) PubMed
    • induced by dissipation of membrane potential (ΔΨ) by addition of a sublethal concentration of valinomycin PubMed
    • expression is increased due to mutations in resE, resB, sdhC, and sdhA PubMed
    • induced by salt stress PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References