Difference between revisions of "YckB"
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* '''[[SubtInteract|Interactions]]:''' | * '''[[SubtInteract|Interactions]]:''' | ||
** [[YckA]]-[[YckB]] {{PubMed|10092453}} | ** [[YckA]]-[[YckB]] {{PubMed|10092453}} | ||
+ | ** [[McpC]]-[[YckB]], for chemotaxis to tryptophan {{PubMed|23038252}} | ||
* '''[[Localization]]:''' associated to the membrane (via [[YckA]]) {{PubMed|10092453}} | * '''[[Localization]]:''' associated to the membrane (via [[YckA]]) {{PubMed|10092453}} | ||
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=References= | =References= | ||
− | + | <pubmed>10092453,23038252, </pubmed> | |
− | <pubmed>10092453,, </pubmed> | ||
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] |
Revision as of 16:19, 8 October 2012
- Description: similar to amino acid ABC transporter (binding protein)
Gene name | yckB |
Synonyms | |
Essential | no |
Product | unknown |
Function | unknown |
Gene expression levels in SubtiExpress: yckB | |
Interactions involving this protein in SubtInteract: YckB | |
MW, pI | 31 kDa, 8.492 |
Gene length, protein length | 861 bp, 287 aa |
Immediate neighbours | yckA, yckC |
Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
ABC transporters, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU03380
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: bacterial solute-binding protein 3 family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: associated to the membrane (via YckA) PubMed
Database entries
- Structure: 2IEE
- UniProt: P42400
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
George D Glekas, Brendan J Mulhern, Abigail Kroc, Keegan A Duelfer, Victor Lei, Christopher V Rao, George W Ordal
The Bacillus subtilis chemoreceptor McpC senses multiple ligands using two discrete mechanisms.
J Biol Chem: 2012, 287(47);39412-8
[PubMed:23038252]
[WorldCat.org]
[DOI]
(I p)
Y Quentin, G Fichant, F Denizot
Inventory, assembly and analysis of Bacillus subtilis ABC transport systems.
J Mol Biol: 1999, 287(3);467-84
[PubMed:10092453]
[WorldCat.org]
[DOI]
(P p)