Difference between revisions of "SbcC"
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|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 3390 bp, 1130 aa | |style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 3390 bp, 1130 aa | ||
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| − | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[sbcD]]'', ''[[ | + | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[sbcD]]'', ''[[hlpB]]'' |
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+[EMBLCDS:CAB12905]+-newId sequences] <br/> (Barbe ''et al.'', 2009)''' | |colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+[EMBLCDS:CAB12905]+-newId sequences] <br/> (Barbe ''et al.'', 2009)''' | ||
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Revision as of 12:54, 21 September 2012
- Description: DNA exonuclease
| Gene name | sbcC |
| Synonyms | yirY |
| Essential | no |
| Product | DNA exonuclease |
| Function | DNA inter-strand cross-link repair |
| Gene expression levels in SubtiExpress: sbcC | |
| Interactions involving this protein in SubtInteract: SbcC | |
| MW, pI | 128 kDa, 5.294 |
| Gene length, protein length | 3390 bp, 1130 aa |
| Immediate neighbours | sbcD, hlpB |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
DNA repair/ recombination, genetic competence
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU10650
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: SbcC subfamily (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: Nucleoid (Mid-cell) PubMed
Database entries
- Structure:
- UniProt: O06714
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Regulatory mechanism:
- Additional information:
Biological materials
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Peter Graumann, Freiburg University, Germany homepage
Your additional remarks
References
Reviews
Peter L Graumann, Tobias Knust
Dynamics of the bacterial SMC complex and SMC-like proteins involved in DNA repair.
Chromosome Res: 2009, 17(2);265-75
[PubMed:19308706]
[WorldCat.org]
[DOI]
(I p)
Original publications
Additional publications: PubMed
