Difference between revisions of "GerPA"
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| − | * '''Description:''' spore germination protein <br/><br/> | + | * '''Description:''' spore [[germination]] protein, facilitates access of nutrient germinants to their cognate germinant receptors in spores’ inner membrane <br/><br/> |
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|style="background:#ABCDEF;" align="center"| '''Product''' || unknown | |style="background:#ABCDEF;" align="center"| '''Product''' || unknown | ||
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| − | |style="background:#ABCDEF;" align="center"|'''Function''' || germination | + | |style="background:#ABCDEF;" align="center"|'''Function''' || [[germination]] |
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU10720 gerPA] | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU10720 gerPA] | ||
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[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 16:11, 22 August 2012
- Description: spore germination protein, facilitates access of nutrient germinants to their cognate germinant receptors in spores’ inner membrane
| Gene name | gerPA |
| Synonyms | yisH |
| Essential | no |
| Product | unknown |
| Function | germination |
| Gene expression levels in SubtiExpress: gerPA | |
| MW, pI | 7 kDa, 4.464 |
| Gene length, protein length | 219 bp, 73 aa |
| Immediate neighbours | gerPB, yisI |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU10720
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: gerPA/gerPF family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: O06721
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Regulatory mechanism:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Xuan Yi Butzin, Anthony J Troiano, William H Coleman, Keren K Griffiths, Christopher J Doona, Florence E Feeherry, Guiwen Wang, Yong-qing Li, Peter Setlow
Analysis of the effects of a gerP mutation on the germination of spores of Bacillus subtilis.
J Bacteriol: 2012, 194(21);5749-58
[PubMed:22904285]
[WorldCat.org]
[DOI]
(I p)
Irnov Irnov, Cynthia M Sharma, Jörg Vogel, Wade C Winkler
Identification of regulatory RNAs in Bacillus subtilis.
Nucleic Acids Res: 2010, 38(19);6637-51
[PubMed:20525796]
[WorldCat.org]
[DOI]
(I p)
J Behravan, H Chirakkal, A Masson, A Moir
Mutations in the gerP locus of Bacillus subtilis and Bacillus cereus affect access of germinants to their targets in spores.
J Bacteriol: 2000, 182(7);1987-94
[PubMed:10715007]
[WorldCat.org]
[DOI]
(P p)
