Difference between revisions of "YwrB"
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| − | * '''Description:''' chromate | + | * '''Description:''' subunit of chromate exporter (with [[YwrA]])<br/><br/> |
{| align="right" border="1" cellpadding="2" | {| align="right" border="1" cellpadding="2" | ||
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|''ywrB'' | |''ywrB'' | ||
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| − | |style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' '' | + | |style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''chr3N '' |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''Essential''' || no | |style="background:#ABCDEF;" align="center"| '''Essential''' || no | ||
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"| '''Product''' || chromate | + | |style="background:#ABCDEF;" align="center"| '''Product''' || chromate exporter |
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"|'''Function''' || chromate | + | |style="background:#ABCDEF;" align="center"|'''Function''' || chromate detoxification |
|- | |- | ||
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU36120 ywrB] | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU36120 ywrB] | ||
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<br/><br/><br/><br/> | <br/><br/><br/><br/> | ||
<br/><br/><br/><br/> | <br/><br/><br/><br/> | ||
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<br/><br/> | <br/><br/> | ||
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=== Additional information=== | === Additional information=== | ||
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=The protein= | =The protein= | ||
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* '''Effectors of protein activity:''' | * '''Effectors of protein activity:''' | ||
| − | * '''Interactions:''' [[YwrA]]-[[YwrB]] | + | * '''[[SubtInteract|Interactions]]:''' |
| + | ** [[YwrA]]-[[YwrB]] {{PubMed|19581367}} | ||
| − | * '''Localization:''' cell membrane | + | * '''[[Localization]]:''' |
| + | ** cell membrane {{PubMed|22900751}} | ||
=== Database entries === | === Database entries === | ||
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=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' | + | * '''Operon:''' ''[[ywrB]]-[[ywrA]]'' {{PubMed|19581367}} |
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ywrB_3721415_3722008_1 ywrB] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ywrB_3721415_3722008_1 ywrB] {{PubMed|22383849}} | ||
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=References= | =References= | ||
| − | <pubmed> 19581367 </pubmed> | + | <pubmed> 19581367 22900751 </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 17:10, 21 August 2012
- Description: subunit of chromate exporter (with YwrA)
| Gene name | ywrB |
| Synonyms | chr3N |
| Essential | no |
| Product | chromate exporter |
| Function | chromate detoxification |
| Gene expression levels in SubtiExpress: ywrB | |
| Interactions involving this protein in SubtInteract: YwrB | |
| MW, pI | 20 kDa, 9.944 |
| Gene length, protein length | 591 bp, 197 aa |
| Immediate neighbours | ywrC, ywrA |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
transporters/ other, resistance against toxic metals, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU36120
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- cell membrane PubMed
Database entries
- Structure:
- UniProt: O05216
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Rene Martínez-Valencia, Guadalupe Reyes-Cortés, Martha I Ramírez-Díaz, Héctor Riveros-Rosas, Carlos Cervantes
Antiparallel membrane topology of paired short-chain chromate transport proteins in Bacillus subtilis.
FEMS Microbiol Lett: 2012, 336(2);113-21
[PubMed:22900751]
[WorldCat.org]
[DOI]
(I p)
Amada Díaz-Magaña, Esther Aguilar-Barajas, Rafael Moreno-Sánchez, Martha I Ramírez-Díaz, Héctor Riveros-Rosas, Eréndira Vargas, Carlos Cervantes
Short-chain chromate ion transporter proteins from Bacillus subtilis confer chromate resistance in Escherichia coli.
J Bacteriol: 2009, 191(17);5441-5
[PubMed:19581367]
[WorldCat.org]
[DOI]
(I p)
