Difference between revisions of "CimH"
| Line 1: | Line 1: | ||
| − | * '''Description:''' | + | * '''Description:''' transporter for citrate and malate <br/><br/> |
{| align="right" border="1" cellpadding="2" | {| align="right" border="1" cellpadding="2" | ||
|- | |- | ||
|style="background:#ABCDEF;" align="center"|'''Gene name''' | |style="background:#ABCDEF;" align="center"|'''Gene name''' | ||
| − | |'' | + | |''cimH'' |
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' '' | + | |style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''yxkJ '' |
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"| '''Essential''' || | + | |style="background:#ABCDEF;" align="center"| '''Essential''' || no |
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"| '''Product''' || | + | |style="background:#ABCDEF;" align="center"| '''Product''' || proton symporter for citrate and malate |
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"|'''Function''' || | + | |style="background:#ABCDEF;" align="center"|'''Function''' || transport of organic acids |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 48 kDa, 6.554 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 48 kDa, 6.554 | ||
| Line 52: | Line 52: | ||
=== Basic information/ Evolution === | === Basic information/ Evolution === | ||
| − | * '''Catalyzed reaction/ biological activity:''' | + | * '''Catalyzed reaction/ biological activity:''' uptake of citrate and malate (symport with protons) [http://www.ncbi.nlm.nih.gov/sites/entrez/11566984 PubMed] |
| − | * '''Protein family:''' | + | * '''Protein family:''' 2-hydroxycarboxylate transporter family |
* '''Paralogous protein(s):''' | * '''Paralogous protein(s):''' | ||
| Line 118: | Line 118: | ||
=References= | =References= | ||
| − | # | + | # Krom et al. (2001) ''Bacillus subtilis'' YxkJ is a secondary transporter of the 2-hydroxycarboxylate transporter family that transports L-malate and citrate. ''J. Bacteriol.'' '''183:''' 5862-5869. [http://www.ncbi.nlm.nih.gov/sites/entrez/11566984 PubMed] |
Revision as of 14:07, 13 February 2009
- Description: transporter for citrate and malate
| Gene name | cimH |
| Synonyms | yxkJ |
| Essential | no |
| Product | proton symporter for citrate and malate |
| Function | transport of organic acids |
| MW, pI | 48 kDa, 6.554 |
| Gene length, protein length | 1350 bp, 450 aa |
| Immediate neighbours | |
| Gene sequence (+200bp) | Protein sequence |
Genetic context 
| |
Contents
The gene
Basic information
- Coordinates:
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: uptake of citrate and malate (symport with protons) PubMed
- Protein family: 2-hydroxycarboxylate transporter family
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- Swiss prot entry:
- KEGG entry:
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
- Krom et al. (2001) Bacillus subtilis YxkJ is a secondary transporter of the 2-hydroxycarboxylate transporter family that transports L-malate and citrate. J. Bacteriol. 183: 5862-5869. PubMed
