Difference between revisions of "YycH"

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|style="background:#ABCDEF;" align="center"|'''Function''' || control of cell wall metabolism
 
|style="background:#ABCDEF;" align="center"|'''Function''' || control of cell wall metabolism
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU40390 yycH]
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/YycH YycH]
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/YycH YycH]

Revision as of 17:48, 7 August 2012

  • Description: negative effector of WalK, controls cell wall metabolism

Gene name yycH
Synonyms
Essential no
Product negative effector of WalK
Function control of cell wall metabolism
Gene expression levels in SubtiExpress: yycH
Interactions involving this protein in SubtInteract: YycH
MW, pI 52 kDa, 5.589
Gene length, protein length 1365 bp, 455 aa
Immediate neighbours yycI, walK
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YycH context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YycH expression.png
























Categories containing this gene/protein

cell wall/ other, transcription factors and their control, membrane proteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU40390

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Localization: cell membrane (according to Swiss-Prot), spotty close to the membrane PubMed

Database entries

  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation: expressed during vegetative growth, repressed during stationary phase PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References