Difference between revisions of "PdxT"

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m (Reverted edits by 134.76.70.252 (talk) to last revision by Jstuelk)
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* '''Operon:''' ''[[pdxS]]-[[pdxT]]''  
 
* '''Operon:''' ''[[pdxS]]-[[pdxT]]''  
  
* '''[[Sigma factor]]:'''  
+
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=pdxT_19968_20558_1 pdxT] {{PubMed|22383849}}
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* '''Sigma factor:'''  
  
 
* '''Regulation:''' negatively controlled by [[Spo0A]] [http://www.ncbi.nlm.nih.gov/sites/entrez/14651647 PubMed]
 
* '''Regulation:''' negatively controlled by [[Spo0A]] [http://www.ncbi.nlm.nih.gov/sites/entrez/14651647 PubMed]

Revision as of 13:46, 7 August 2012

  • Description: pyridoxal-5'-phosphate synthase (glutaminase domain)

Gene name pdxT
Synonyms yaaE
Essential no
Product pyridoxal-5'-phosphate synthase (glutaminase domain)
Function pyridoxal-5'-phosphate biosynthesis
Interactions involving this protein in SubtInteract: PdxT
MW, pI 21 kDa, 4.984
Gene length, protein length 588 bp, 196 aa
Immediate neighbours pdxS, serS
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YaaE context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

biosynthesis of cofactors

This gene is a member of the following regulons

Spo0A regulon

The gene

Basic information

  • Locus tag: BSU00120

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: glutamine amidotransferase pdxT/SNO family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation: negatively controlled by Spo0A PubMed
    • repressed under conditions that trigger sporulation (Spo0A) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References