Difference between revisions of "NatR"
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| − | + | * '''Description:''' [[two-component systems|two-component]] response regulator, regulation of the ''[[natA]]-[[natB]]'' operon <br/><br/> | |
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|style="background:#ABCDEF;" align="center"|'''Function''' || regulation of the ''[[natA]]-[[natB]]'' operon | |style="background:#ABCDEF;" align="center"|'''Function''' || regulation of the ''[[natA]]-[[natB]]'' operon | ||
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/NatR NatR] | |colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/NatR NatR] | ||
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|colspan="2" | '''Genetic context''' <br/> [[Image:yccH_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yccH_context.gif]] | ||
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> | <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> | ||
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__TOC__ | __TOC__ | ||
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* '''Operon:''' ''natR'' (according to [http://dbtbs.hgc.jp/COG/prom/yccH.html DBTBS]) | * '''Operon:''' ''natR'' (according to [http://dbtbs.hgc.jp/COG/prom/yccH.html DBTBS]) | ||
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* '''Regulation:''' | * '''Regulation:''' | ||
Revision as of 10:50, 7 August 2012
- Description: two-component response regulator, regulation of the natA-natB operon
| Gene name | natR |
| Synonyms | yccH |
| Essential | no |
| Product | two-component response regulator |
| Function | regulation of the natA-natB operon |
| Interactions involving this protein in SubtInteract: NatR | |
| MW, pI | 26 kDa, 6.614 |
| Gene length, protein length | 699 bp, 233 aa |
| Immediate neighbours | natK, natA |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
Categories containing this gene/protein
metal ion homeostasis (K, Na, Ca, Mg), transcription factors and their control, phosphoproteins
This gene is a member of the following regulons
The NatR regulon:
The gene
Basic information
- Locus tag: BSU02740
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: OmpR family of two-component response regulators
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification: phosphorylated by NatK on an Asp residue
- Cofactor(s):
- Effectors of protein activity: phosphorylation likely affects DNA-binding activity
- Localization: cytoplasm (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: P70955
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: natR (according to DBTBS)
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Mitsuo Ogura, Kensuke Tsukahara, Kentaro Hayashi, Teruo Tanaka
The Bacillus subtilis NatK-NatR two-component system regulates expression of the natAB operon encoding an ABC transporter for sodium ion extrusion.
Microbiology (Reading): 2007, 153(Pt 3);667-675
[PubMed:17322186]
[WorldCat.org]
[DOI]
(P p)
C Fabret, V A Feher, J A Hoch
Two-component signal transduction in Bacillus subtilis: how one organism sees its world.
J Bacteriol: 1999, 181(7);1975-83
[PubMed:10094672]
[WorldCat.org]
[DOI]
(P p)
