Difference between revisions of "XylA"
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|style="background:#ABCDEF;" align="center"|'''Function''' || utilization of xylan and xylose | |style="background:#ABCDEF;" align="center"|'''Function''' || utilization of xylan and xylose | ||
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+ | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU17600 xylA] | ||
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/carbohydrate_metabolic_pathways.html Sugar catabolism]''' | |colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/carbohydrate_metabolic_pathways.html Sugar catabolism]''' |
Revision as of 10:05, 7 August 2012
- Description: xylose isomerase
Gene name | xylA |
Synonyms | |
Essential | no |
Product | xylose isomerase |
Function | utilization of xylan and xylose |
Gene expression levels in SubtiExpress: xylA | |
Metabolic function and regulation of this protein in SubtiPathways: Sugar catabolism | |
MW, pI | 50 kDa, 5.635 |
Gene length, protein length | 1335 bp, 445 aa |
Immediate neighbours | xylR, xylB |
Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
utilization of specific carbon sources
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU17600
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: D-xylose = D-xylulose (according to Swiss-Prot)
- Protein family: xylose isomerase family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- cytoplasm (according to Swiss-Prot)
Database entries
- Structure: 1A0D (Geobacillus stearothermophilus)
- UniProt: P04788
- KEGG entry: [3]
- E.C. number: 5.3.1.5
Additional information
Expression and regulation
- Additional information:
Biological materials
- Mutant: GP1151 (del aphA3) available in Stülke lab
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Wolfgang Hillen, Erlangen University, Germany Homepage
Your additional remarks
References