Difference between revisions of "YdjO"

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(Extended information on the protein)
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** YdjO interacts with the [[RNA polymerase]] {{PubMed|21710567}}
 
** YdjO interacts with the [[RNA polymerase]] {{PubMed|21710567}}
  
* '''Localization:'''
+
* '''[[Localization]]:'''
  
 
=== Database entries ===
 
=== Database entries ===

Revision as of 18:30, 16 July 2012

  • Description: unknown

Gene name ydjO
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 7 kDa, 7.643
Gene length, protein length 207 bp, 69 aa
Immediate neighbours ydjN, ydjP
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YdjO context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YdjO expression.png
























Categories containing this gene/protein

cell envelope stress proteins (controlled by SigM, V, W, X, Y), cold stress proteins, phosphoproteins

This gene is a member of the following regulons

SigW regulon

The gene

Basic information

  • Locus tag: BSU06270

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
    • phosphorylated on Arg-7 PubMed
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed

Alexander K W Elsholz, Kürsad Turgay, Stephan Michalik, Bernd Hessling, Katrin Gronau, Dan Oertel, Ulrike Mäder, Jörg Bernhardt, Dörte Becher, Michael Hecker, Ulf Gerth
Global impact of protein arginine phosphorylation on the physiology of Bacillus subtilis.
Proc Natl Acad Sci U S A: 2012, 109(19);7451-6
[PubMed:22517742] [WorldCat.org] [DOI] (I p)

Carsten L Beckering, Leif Steil, Michael H W Weber, Uwe Völker, Mohamed A Marahiel
Genomewide transcriptional analysis of the cold shock response in Bacillus subtilis.
J Bacteriol: 2002, 184(22);6395-402
[PubMed:12399512] [WorldCat.org] [DOI] (P p)

X Huang, A Gaballa, M Cao, J D Helmann
Identification of target promoters for the Bacillus subtilis extracytoplasmic function sigma factor, sigma W.
Mol Microbiol: 1999, 31(1);361-71
[PubMed:9987136] [WorldCat.org] [DOI] (P p)