Difference between revisions of "Ldt"
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=Expression and regulation= | =Expression and regulation= | ||
− | * '''Operon:''' ''ldt'' {{PubMed|11011148}} | + | * '''Operon:''' |
+ | ** ''[[ykuE]]-[[ldt]]-[[ykuC]]'' {{PubMed|22383849}} | ||
+ | ** ''ldt'' {{PubMed|11011148}} | ||
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ykuD_1476518_1477012_-1 ldt] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ykuD_1476518_1477012_-1 ldt] {{PubMed|22383849}} | ||
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=References= | =References= | ||
'''Additional publications:''' {{PubMed|22278298,22579252}} | '''Additional publications:''' {{PubMed|22278298,22579252}} | ||
− | <pubmed>12850135,11011148 17311917 | + | <pubmed>12850135,11011148 17311917 22383849 </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] |
Revision as of 16:23, 9 July 2012
- Description: L,D-transpeptidase involved in cell wall synthesis
Gene name | ldt |
Synonyms | ykuD |
Essential | no |
Product | L,D-transpeptidase |
Function | cell wall biosynthesis |
MW, pI | 17 kDa, 10.252 |
Gene length, protein length | 492 bp, 164 aa |
Immediate neighbours | ykuC, ykuE |
Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
cell wall synthesis, biosynthesis of cell wall components, sporulation proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU14040
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: LysM repeat (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- spore wall (according to Swiss-Prot)
Database entries
- Structure: 1Y7M
- UniProt: O34816
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Additional publications: PubMed