Difference between revisions of "FlhO"
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| − | * '''Description:''' flagellar basal-body rod protein <br/><br/> | + | * '''Description:''' flagellar basal-body rod protein, required for hook assembly <br/><br/> |
{| align="right" border="1" cellpadding="2" | {| align="right" border="1" cellpadding="2" | ||
| Line 12: | Line 12: | ||
|style="background:#ABCDEF;" align="center"| '''Product''' || flagellar basal-body rod protein | |style="background:#ABCDEF;" align="center"| '''Product''' || flagellar basal-body rod protein | ||
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"|'''Function''' || | + | |style="background:#ABCDEF;" align="center"|'''Function''' || [[motility and chemotaxis]] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 29 kDa, 4.733 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 29 kDa, 4.733 | ||
| Line 52: | Line 52: | ||
===Phenotypes of a mutant === | ===Phenotypes of a mutant === | ||
| + | * lack of [[SigD]]-dependent gene expression (no ''[[hag]]'' expression), no motility {{PubMed|22730131}} | ||
=== Database entries === | === Database entries === | ||
| Line 68: | Line 69: | ||
=== Basic information/ Evolution === | === Basic information/ Evolution === | ||
| − | * '''Catalyzed reaction/ biological activity:''' | + | * '''Catalyzed reaction/ biological activity:''' assembly of the flagellar hook {{PubMed|22730131}} |
* '''Protein family:''' flagella basal body rod proteins family (according to Swiss-Prot) | * '''Protein family:''' flagella basal body rod proteins family (according to Swiss-Prot) | ||
| − | * '''Paralogous protein(s):''' | + | * '''Paralogous protein(s):''' [[FlgE]], [[FlhP]] |
=== Extended information on the protein === | === Extended information on the protein === | ||
| Line 105: | Line 106: | ||
* '''Operon:''' | * '''Operon:''' | ||
** ''[[usd]]-[[spoIIID]]-[[mbl]]-[[flhO]]-[[flhP]]'' {{PubMed|9023218,7836311}} | ** ''[[usd]]-[[spoIIID]]-[[mbl]]-[[flhO]]-[[flhP]]'' {{PubMed|9023218,7836311}} | ||
| − | ** ''[[flhO]]-[[flhP]]'' {{PubMed|15033535}} | + | ** ''[[flhO]]-[[flhP]]'' {{PubMed|15033535,22730131}} |
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=flhO_3746279_3747091_-1 flhO] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=flhO_3746279_3747091_-1 flhO] {{PubMed|22383849}} | ||
| Line 111: | Line 112: | ||
* '''Sigma factor:''' | * '''Sigma factor:''' | ||
** ''[[usd]]'': [[SigE]] {{PubMed|9023218}} | ** ''[[usd]]'': [[SigE]] {{PubMed|9023218}} | ||
| − | ** ''[[flhO]]'': [[SigD]] {{PubMed|15033535}} | + | ** ''[[flhO]]'': [[SigD]] {{PubMed|15033535,22730131}} |
* '''Regulation:''' | * '''Regulation:''' | ||
| Line 138: | Line 139: | ||
=References= | =References= | ||
| − | + | '''Additional publications:''' {{PubMed|22730131}} | |
<pubmed>18957862, 9023218,7836311 15033535 </pubmed> | <pubmed>18957862, 9023218,7836311 15033535 </pubmed> | ||
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 14:20, 27 June 2012
- Description: flagellar basal-body rod protein, required for hook assembly
| Gene name | flhO |
| Synonyms | flgG, yvyA |
| Essential | no |
| Product | flagellar basal-body rod protein |
| Function | motility and chemotaxis |
| MW, pI | 29 kDa, 4.733 |
| Gene length, protein length | 810 bp, 270 aa |
| Immediate neighbours | flhP, mbl |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU36400
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: assembly of the flagellar hook PubMed
- Protein family: flagella basal body rod proteins family (according to Swiss-Prot)
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: extracellular (no signal peptide) PubMed
Database entries
- Structure:
- UniProt: P39752
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Additional publications: PubMed
Birgit Voigt, Haike Antelmann, Dirk Albrecht, Armin Ehrenreich, Karl-Heinz Maurer, Stefan Evers, Gerhard Gottschalk, Jan Maarten van Dijl, Thomas Schweder, Michael Hecker
Cell physiology and protein secretion of Bacillus licheniformis compared to Bacillus subtilis.
J Mol Microbiol Biotechnol: 2009, 16(1-2);53-68
[PubMed:18957862]
[WorldCat.org]
[DOI]
(I p)
Masakuni Serizawa, Hiroki Yamamoto, Hirotake Yamaguchi, Yasutaro Fujita, Kazuo Kobayashi, Naotake Ogasawara, Junichi Sekiguchi
Systematic analysis of SigD-regulated genes in Bacillus subtilis by DNA microarray and Northern blotting analyses.
Gene: 2004, 329;125-36
[PubMed:15033535]
[WorldCat.org]
[DOI]
(P p)
A Decatur, M T McMurry, B N Kunkel, R Losick
Translation of the mRNA for the sporulation gene spoIIID of Bacillus subtilis is dependent upon translation of a small upstream open reading frame.
J Bacteriol: 1997, 179(4);1324-8
[PubMed:9023218]
[WorldCat.org]
[DOI]
(P p)
Y Abhayawardhane, G C Stewart
Bacillus subtilis possesses a second determinant with extensive sequence similarity to the Escherichia coli mreB morphogene.
J Bacteriol: 1995, 177(3);765-73
[PubMed:7836311]
[WorldCat.org]
[DOI]
(P p)
