Difference between revisions of "SdaAB"

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* '''[[SubtInteract|Interactions]]:'''
 
* '''[[SubtInteract|Interactions]]:'''
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** [[SdaAA]]-[[SdaAB]] {{PubMed|22686449}}
  
 
* '''[[Localization]]:'''
 
* '''[[Localization]]:'''
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=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:'''  
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* '''Operon:''' ''[[sdaAB]]-[[sdaAA]]'' {{PubMed|22383849}}
  
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=sdaAB_1658242_1658904_1 sdaAB] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=sdaAB_1658242_1658904_1 sdaAB] {{PubMed|22383849}}
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=References=
 
=References=
 
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<pubmed>22383849 22686449</pubmed>
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 11:04, 13 June 2012

  • Description: L-serine deaminase

Gene name sdaAB
Synonyms yloW, sdaA
Essential no
Product L-serine deaminase (beta chain)
Function serine utilization
Metabolic function and regulation of this protein in SubtiPathways:
Ala, Gly, Ser
MW, pI 23 kDa, 5.103
Gene length, protein length 660 bp, 220 aa
Immediate neighbours yloV, sdaAA
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
SdaAB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
SdaAB expression.png




























Categories containing this gene/protein

utilization of amino acids

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU15850

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: L-serine = pyruvate + NH3 (according to Swiss-Prot)
  • Protein family: ACT domain (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References