Difference between revisions of "YvdF"
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|colspan="2" | '''Genetic context''' <br/> [[Image:yvdF_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yvdF_context.gif]] | ||
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> | <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> | ||
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+ | |colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=mdxD_3555902_3557671_-1 Expression at a glance]'''   {{PubMed|22383849}}<br/>[[Image:yvdF_expression.png|500px]] | ||
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Revision as of 09:55, 23 April 2012
- Description: glucan 1,4-alpha-maltohydrolase, neopullulanase, maltogenic amylase
Gene name | yvdF |
Synonyms | |
Essential | no |
Product | glucan 1,4-alpha-maltohydrolase, neopullulanase, maltogenic amylase |
Function | starch and maltodextrin utilization |
Metabolic function and regulation of this protein in SubtiPathways: Sugar catabolism | |
MW, pI | 68 kDa, 5.178 |
Gene length, protein length | 1767 bp, 589 aa |
Immediate neighbours | mdxE, yvdE |
Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context This image was kindly provided by SubtiList
| |
Expression at a glance PubMed |
Contents
Categories containing this gene/protein
utilization of specific carbon sources, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU34620
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: BbmA subfamily (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- on both sides of the cytoplasmic membrane and in the periplasm during vegetative growth but in the cytoplasm of prespores PubMed
Database entries
- Structure: 1J0J (from G. stearothermophilus, 56% identity, complex with maltotetraose), 1J0H (from G. stearothermophilus, 56% identity)
- UniProt: O06988
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References