Difference between revisions of "AlaT"

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|colspan="2" | '''Genetic context''' <br/> [[Image:alaT_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:alaT_context.gif]]
 
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|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yugH_3225772_3226932_-1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:alaT_expression.png|500px]]
 
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Revision as of 08:09, 23 April 2012

  • Description: similar to PLP-dependent methionine aminotransferase

Gene name alaT
Synonyms yugH
Essential no
Product unknown
Function unknown
MW, pI 42 kDa, 5.106
Gene length, protein length 1158 bp, 386 aa
Immediate neighbours yugI, alaR
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
AlaT context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
AlaT expression.png




























Categories containing this gene/protein

poorly characterized/ putative enzymes

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU31400

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

The gene is annotated in KEGG as an ortholog of N-succinyldiaminopimelate aminotransferase EC 2.6.1.17. It is annotated in Swiss-Prot as “alanine transaminase”. In MetaCyc the gene is marked as “similar to aspartate aminotransferase”. No literature/experimental evidence supporting the annotation is available. PubMed

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References