Difference between revisions of "YwhA"
| Line 99: | Line 99: | ||
* '''Operon:''' ''[[thrZ]]-[[ywhA]]'' {{PubMed|1379177}} | * '''Operon:''' ''[[thrZ]]-[[ywhA]]'' {{PubMed|1379177}} | ||
| − | * '''[ | + | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ywhA_3853717_3854136_-1 ywhA] {{PubMed|22383849}} |
| + | |||
| + | * '''Sigma factor:''' [[SigA]] {{PubMed|1379177}} | ||
* '''Regulation:''' | * '''Regulation:''' | ||
| Line 107: | Line 109: | ||
** [[T-box]]: [[RNA switch]], transcriptional antitermination {{PubMed|19258532}} | ** [[T-box]]: [[RNA switch]], transcriptional antitermination {{PubMed|19258532}} | ||
| − | * '''Additional information:''' | + | * '''Additional information:''' |
=Biological materials = | =Biological materials = | ||
Revision as of 08:41, 17 April 2012
- Description: similar to transcriptional regulator (MarR family)
| Gene name | ywhA |
| Synonyms | |
| Essential | no |
| Product | unknown |
| Function | unknown |
| Metabolic function and regulation of this protein in SubtiPathways: tRNA charging | |
| MW, pI | 15 kDa, 8.141 |
| Gene length, protein length | 417 bp, 139 aa |
| Immediate neighbours | ywhB, thrZ |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
Categories containing this gene/protein
transcription factors and their control
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU37550
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- UniProt: P70993
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulatory mechanism:
- T-box: RNA switch, transcriptional antitermination PubMed
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
