Difference between revisions of "YuiC"

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* '''Operon:''' ''yuiC'' (according to [http://dbtbs.hgc.jp/COG/prom/yuiC.html DBTBS])
 
* '''Operon:''' ''yuiC'' (according to [http://dbtbs.hgc.jp/COG/prom/yuiC.html DBTBS])
  
* '''[[Sigma factor]]:''' [[SigF]] {{PubMed|16497325}}
+
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yuiC_3298584_3299240_-1 yuiC] {{PubMed|22383849}}
 +
 
 +
* '''Sigma factor:''' [[SigF]] {{PubMed|16497325}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  

Revision as of 16:35, 16 April 2012

  • Description: sporulation protein

Gene name yuiC
Synonyms
Essential no
Product sporulation protein
Function unknown
MW, pI 24 kDa, 8.588
Gene length, protein length 654 bp, 218 aa
Immediate neighbours yuiD, yuiB
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YuiC context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

sporulation proteins

This gene is a member of the following regulons

CodY regulon, SigF regulon

The gene

Basic information

  • Locus tag: BSU32070

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon: yuiC (according to DBTBS)
  • Regulation:
    • expressed early during sporulation in the forespore (SigF) PubMed
    • repressed during growth in the presence of branched chain amino acids (CodY) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Stephanie T Wang, Barbara Setlow, Erin M Conlon, Jessica L Lyon, Daisuke Imamura, Tsutomu Sato, Peter Setlow, Richard Losick, Patrick Eichenberger
The forespore line of gene expression in Bacillus subtilis.
J Mol Biol: 2006, 358(1);16-37
[PubMed:16497325] [WorldCat.org] [DOI] (P p)

Virginie Molle, Yoshiko Nakaura, Robert P Shivers, Hirotake Yamaguchi, Richard Losick, Yasutaro Fujita, Abraham L Sonenshein
Additional targets of the Bacillus subtilis global regulator CodY identified by chromatin immunoprecipitation and genome-wide transcript analysis.
J Bacteriol: 2003, 185(6);1911-22
[PubMed:12618455] [WorldCat.org] [DOI] (P p)

Ulrike Mäder, Georg Homuth, Christian Scharf, Knut Büttner, Rüdiger Bode, Michael Hecker
Transcriptome and proteome analysis of Bacillus subtilis gene expression modulated by amino acid availability.
J Bacteriol: 2002, 184(15);4288-95
[PubMed:12107147] [WorldCat.org] [DOI] (P p)