Difference between revisions of "YtrF"
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* '''Operon:''' ''[[ytrG]]-[[ytrA]]-[[ytrB]]-[[ytrC]]-[[ytrD]]-[[ytrE]]-[[ytrF]]'' {{PubMed|10986249,21856850}} | * '''Operon:''' ''[[ytrG]]-[[ytrA]]-[[ytrB]]-[[ytrC]]-[[ytrD]]-[[ytrE]]-[[ytrF]]'' {{PubMed|10986249,21856850}} | ||
− | * '''[ | + | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ytrF_3113979_3115289_-1 ytrF] {{PubMed|22383849}} |
+ | |||
+ | * '''Sigma factor:''' [[SigA]] {{PubMed|10986249}} | ||
* '''Regulation:''' | * '''Regulation:''' | ||
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** [[YtrA]]: transcription repression {{PubMed|10986249,21856850}} | ** [[YtrA]]: transcription repression {{PubMed|10986249,21856850}} | ||
− | * '''Additional information:''' | + | * '''Additional information:''' |
=Biological materials = | =Biological materials = |
Revision as of 15:48, 16 April 2012
- Description: ABC transporter (substrate-binding lipoprotein)
Gene name | ytrF |
Synonyms | |
Essential | no |
Product | ABC transporter (substrate-binding lipoprotein) |
Function | unknown |
Interactions involving this protein in SubtInteract: YtrF | |
Metabolic function and regulation of this protein in SubtiPathways: Central C-metabolism | |
MW, pI | 48 kDa, 8.292 |
Gene length, protein length | 1308 bp, 436 aa |
Immediate neighbours | bceR, ytrE |
Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context This image was kindly provided by SubtiList
|
Contents
Categories containing this gene/protein
ABC transporters, cold stress proteins, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU30410
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: ABC-4 integral membrane protein family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: cell membrane (via YtrC-YtrD) PubMed
Database entries
- Structure:
- UniProt: O35005
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Additional publications: PubMed