Difference between revisions of "RapE"
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* '''Operon:''' ''[[rapE]]-[[phrE]]'' {{PubMed|11466295,10629174}} | * '''Operon:''' ''[[rapE]]-[[phrE]]'' {{PubMed|11466295,10629174}} | ||
− | * '''[ | + | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=rapE_2659213_2660340_1 rapE] {{PubMed|22383849}} |
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+ | * '''Sigma factor:''' | ||
* '''Regulation:''' | * '''Regulation:''' | ||
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** [[CodY]]: transcription repression [http://www.ncbi.nlm.nih.gov/sites/entrez/12618455 PubMed] | ** [[CodY]]: transcription repression [http://www.ncbi.nlm.nih.gov/sites/entrez/12618455 PubMed] | ||
− | * '''Additional information:''' | + | * '''Additional information:''' |
=Biological materials = | =Biological materials = |
Revision as of 11:49, 16 April 2012
- Description: response regulator aspartate phosphatase, dephosphorylates Spo0F-P, control of the phosphorelay
Gene name | rapE |
Synonyms | yqcH |
Essential | no |
Product | response regulator aspartate phosphatase |
Function | control of sporulation initiation |
Interactions involving this protein in SubtInteract: RapE | |
Function and regulation of this protein in SubtiPathways: Phosphorelay | |
MW, pI | 44 kDa, 7.313 |
Gene length, protein length | 1125 bp, 375 aa |
Immediate neighbours | yqcI, phrE |
Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context This image was kindly provided by SubtiList
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Contents
Categories containing this gene/protein
protein modification, transcription factors and their control, phosphorelay, quorum sensing, Skin element
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU25830
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: RAP family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: P45943
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Regulation:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References