Difference between revisions of "XkdC"

From SubtiWiki
Jump to: navigation, search
m (Reverted edits by 134.76.70.252 (talk) to last revision by Jstuelk)
Line 100: Line 100:
 
* '''Operon:''' ''[[xkdB]]-[[xkdC]]-[[xkdD]]-[[xtrA]]'' {{PubMed|8083174}}
 
* '''Operon:''' ''[[xkdB]]-[[xkdC]]-[[xkdD]]-[[xtrA]]'' {{PubMed|8083174}}
  
* '''[[Sigma factor]]:'''  
+
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=xkdC_1322750_1323550_1 xkdC] {{PubMed|22383849}}
 +
 
 +
* '''Sigma factor:'''  
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
Line 107: Line 109:
 
** [[Xre]]: transcription repression {{PubMed|8083174}}
 
** [[Xre]]: transcription repression {{PubMed|8083174}}
  
* '''Additional information:'''  
+
* '''Additional information:'''
  
 
=Biological materials =
 
=Biological materials =

Revision as of 07:11, 13 April 2012

  • Description: PBSX prophage

Gene name xkdC
Synonyms ykxC
Essential no
Product unknown
Function unknown
MW, pI 30 kDa, 7.967
Gene length, protein length 798 bp, 266 aa
Immediate neighbours xkdB, xkdD
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
XkdC context.gif
This image was kindly provided by SubtiList





Categories containing this gene/protein

PBSX prophage

This gene is a member of the following regulons

Xre regulon

The gene

Basic information

  • Locus tag: BSU12530

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s): YqaM

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References