Difference between revisions of "YfjP"

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m (Reverted edits by 134.76.70.252 (talk) to last revision by Lflorez)
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* '''Operon:''' ''[[yfjP]]-[[yfjO]]'' (according to [http://dbtbs.hgc.jp/COG/prom/yfjPO.html DBTBS])
 
* '''Operon:''' ''[[yfjP]]-[[yfjO]]'' (according to [http://dbtbs.hgc.jp/COG/prom/yfjPO.html DBTBS])
  
* '''[[Sigma factor]]:'''  
+
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yfjP_872425_873288_1 yfjP] {{PubMed|22383849}}
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 +
* '''Sigma factor:'''  
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  

Revision as of 16:14, 12 April 2012

  • Description: similar to DNA-3-methyladenine glycosidase II

Gene name yfjP
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 33 kDa, 5.524
Gene length, protein length 861 bp, 287 aa
Immediate neighbours yfjQ, yfjO
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YfjP context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

DNA repair/ recombination

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU08010

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: Hydrolysis of alkylated DNA, releasing 3-methyladenine, 3-methylguanine, 7-methylguanine and 7-methyladenine (according to Swiss-Prot)
  • Protein family: alkylbase DNA glycosidase alkA family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References