Difference between revisions of "CmpA"
(Created page with "* '''Description:''' spore coat protein <br/><br/> {| align="right" border="1" cellpadding="2" |- |style="background:#ABCDEF;" align="center"|'''Gene name''' |''cmpA'' |- |styl...") |
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= This gene is a member of the following [[regulons]] = | = This gene is a member of the following [[regulons]] = | ||
{{SubtiWiki regulon|[[SigE regulon]]}}, | {{SubtiWiki regulon|[[SigE regulon]]}}, | ||
| − | {{SubtiWiki regulon|[[ | + | {{SubtiWiki regulon|[[SpoIIID regulon]]}} |
=The gene= | =The gene= | ||
| Line 42: | Line 42: | ||
=== Basic information === | === Basic information === | ||
| − | * '''Locus tag:''' | + | * '''Locus tag:''' not available |
===Phenotypes of a mutant === | ===Phenotypes of a mutant === | ||
| Line 48: | Line 48: | ||
=== Database entries === | === Database entries === | ||
| − | * '''DBTBS entry:''' | + | * '''DBTBS entry:''' no entry |
| − | * '''SubtiList entry:''' | + | * '''SubtiList entry:''' no entry |
=== Additional information=== | === Additional information=== | ||
| Line 59: | Line 59: | ||
=== Basic information/ Evolution === | === Basic information/ Evolution === | ||
| − | * '''Catalyzed reaction/ biological activity:''' | + | * '''Catalyzed reaction/ biological activity:''' |
| − | * '''Protein family:''' | + | * '''Protein family:''' |
* '''Paralogous protein(s):''' | * '''Paralogous protein(s):''' | ||
| Line 78: | Line 78: | ||
* '''[[SubtInteract|Interactions]]:''' | * '''[[SubtInteract|Interactions]]:''' | ||
| − | |||
| − | |||
| − | |||
* '''[[Localization]]:''' | * '''[[Localization]]:''' | ||
| − | ** | + | ** surface of the developing spore {{PubMed|22463703}} |
| + | |||
=== Database entries === | === Database entries === | ||
* '''Structure:''' | * '''Structure:''' | ||
| − | * '''UniProt:''' | + | * '''UniProt:''' |
| − | * '''KEGG entry:''' | + | * '''KEGG entry:''' |
* '''E.C. number:''' | * '''E.C. number:''' | ||
| Line 98: | Line 96: | ||
=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' ''[[ | + | * '''Operon:''' ''[[cmpA]]'' {{PubMed|22463703}} |
| − | * '''[[Sigma factor]]:''' [[SigE]] {{PubMed| | + | * '''[[Sigma factor]]:''' [[SigE]] {{PubMed|22463703}} |
* '''Regulation:''' | * '''Regulation:''' | ||
| − | + | ** expressed early during sporulation in the mother cell ([[SigE]]) {{PubMed|22463703}} | |
| − | ** expressed during sporulation in the mother cell ([[SigE | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| + | ** [[SpoIIID]]: transcription activation {{PubMed|22463703}} | ||
* '''Additional information:''' | * '''Additional information:''' | ||
Revision as of 16:39, 11 April 2012
- Description: spore coat protein
| Gene name | cmpA |
| Synonyms | |
| Essential | no |
| Product | cortex morphogenetic protein A |
| Function | |
| MW, pI | |
| Gene length, protein length | 111 bp, 37 aa |
| Immediate neighbours | ydcI, ydcK |
| Get the DNA and protein sequences (Ebmeier et al., 2012) | |
| Genetic context | |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: not available
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: no entry
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- surface of the developing spore PubMed
Database entries
- Structure:
- UniProt:
- KEGG entry:
- E.C. number:
Additional information
Expression and regulation
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Arthur Aronson, Purdue University, West Lafayette, USA homepage
Adriano Henriques, Lisbon, Portugal homepage
Your additional remarks
References
Additional publications: PubMed
