Difference between revisions of "SmiA"
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|style="background:#ABCDEF;" align="center"|'''Function''' || control of swarming | |style="background:#ABCDEF;" align="center"|'''Function''' || control of swarming | ||
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− | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || | + | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 15 kDa, 4.673 |
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− | |style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || | + | |style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 375 bp, 125 aa |
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− | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' ||'' [[ | + | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' ||'' [[yvyD]]'', ''[[fliT]]'' |
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|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/genE_nucleotide.txt Gene sequence (+200bp) ]''' | |style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/genE_nucleotide.txt Gene sequence (+200bp) ]''' |
Revision as of 16:32, 6 March 2012
- Description: inhibitor of swarming motility
Gene name | smiA |
Synonyms | yvzG |
Essential | no |
Product | inhibitor of swarming motility |
Function | control of swarming |
MW, pI | 15 kDa, 4.673 |
Gene length, protein length | 375 bp, 125 aa |
Immediate neighbours | yvyD, fliT |
Gene sequence (+200bp) | Protein sequence |
Genetic context File:YvzG context.gif |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag:
Phenotypes of a mutant
A mutation in smiA suppresses the motility defect of a lytC mutant PubMed
Database entries
- DBTBS entry: no entry
- SubtiList entry: no entry
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: C0H3R9
- KEGG entry:
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant: available in the Daniel Kearns lab
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Daniel Kearns, Indiana University, Bloomington, USA, homepage
Your additional remarks
References
Rui Chen, Sarah B Guttenplan, Kris M Blair, Daniel B Kearns
Role of the sigmaD-dependent autolysins in Bacillus subtilis population heterogeneity.
J Bacteriol: 2009, 191(18);5775-84
[PubMed:19542270]
[WorldCat.org]
[DOI]
(I p)