Difference between revisions of "QdoR"
| Line 40: | Line 40: | ||
{{SubtiWiki regulon|[[LmrA regulon]]}}, | {{SubtiWiki regulon|[[LmrA regulon]]}}, | ||
{{SubtiWiki regulon|[[YxaF regulon]]}} | {{SubtiWiki regulon|[[YxaF regulon]]}} | ||
| + | =The [[YxaF regulon]]:= | ||
| + | * ''[[qdoI]]-[[yxaH]]'', ''[[yxaF]]'' | ||
=The gene= | =The gene= | ||
Revision as of 19:11, 14 January 2011
| Gene name | yxaF |
| Synonyms | |
| Essential | no |
| Product | transcriptional regulator |
| Function | control of quercetin utilization |
| MW, pI | 20 kDa, 6.111 |
| Gene length, protein length | 573 bp, 191 aa |
| Immediate neighbours | qdoI, yxnA |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
Categories containing this gene/protein
transcription factors and their control, resistance against other toxic compounds (nitric oxide, phenolic acids, flavonoids, oxalate)
This gene is a member of the following regulons
The YxaF regulon:
The gene
Basic information
- Locus tag: BSU39990
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s): LmrA
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity: flavonoids such as quercetin act as molecular inducers and result in release from DNA targets PubMed
- Interactions:
- Localization:
Database entries
- Structure: 1SGM
- UniProt: P42105
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: yxaF PubMed
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
