Difference between revisions of "YwcC"
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| − | * '''Description:''' transcription repressor (TetR family), controls [[ | + | * '''Description:''' transcription repressor (TetR family), controls ''[[slrA]]'' expression <br/><br/> |
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= This gene is a member of the following [[regulons]] = | = This gene is a member of the following [[regulons]] = | ||
| − | + | =The [[YwcC regulon]]:= | |
| + | * ''[[slrA]]'' | ||
=The gene= | =The gene= | ||
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=== Additional information=== | === Additional information=== | ||
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| − | |||
| − | |||
=The protein= | =The protein= | ||
Revision as of 19:10, 14 January 2011
- Description: transcription repressor (TetR family), controls slrA expression
| Gene name | ywcC |
| Synonyms | ipa-33d |
| Essential | no |
| Product | transcription repressor (TetR family) |
| Function | control of SlrA expression |
| Regulation of this protein in SubtiPathways: Biofilm | |
| MW, pI | 25 kDa, 8.466 |
| Gene length, protein length | 669 bp, 223 aa |
| Immediate neighbours | gtaC, slrA |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
Categories containing this gene/protein
transcription factors and their control, biofilm formation
This gene is a member of the following regulons
The YwcC regulon:
The gene
Basic information
- Locus tag: BSU38220
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- UniProt: P39601
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Yunrong Chai, Roberto Kolter, Richard Losick
Paralogous antirepressors acting on the master regulator for biofilm formation in Bacillus subtilis.
Mol Microbiol: 2009, 74(4);876-87
[PubMed:19788541]
[WorldCat.org]
[DOI]
(I p)
Kazuo Kobayashi
SlrR/SlrA controls the initiation of biofilm formation in Bacillus subtilis.
Mol Microbiol: 2008, 69(6);1399-410
[PubMed:18647168]
[WorldCat.org]
[DOI]
(I p)
